Chemistry in RSpace

Native support for chemicals, structures, and reactions

RSpace and Chemistry go hand in hand

RSpace is built for research across disciplines. For labs that work with chemicals and chemical structures, the tools you need are a core part of the RSpace platform, integrated into research documentation and sample management workflows, and connected to a broad ecosystem of research and research data management tools.

Chemical structures as research data

RSpace handles chemical structures as proper research data, not just as attachments or images.

✔ Draw structures and reactions with the integrated open-source Ketcher editor, which supports ChemDraw and other standard formats

✔ Look up and directly import compounds by name, CAS number, or SMILES from PubChem

Search for any structure or substructure across all your documents

✔ Chemical structures are stored with their metadata, versioned, and available in a searchable gallery

✔ Import and export in formats such as ChemDraw (CDX/CDXML), MDL Molfile, SDF, SMILES, InChI, CML, and more

Reaction planning and inventory management

RSpace connects experimental planning to bench work in a single workflow, without separate tools or manual data transfer.

✔ Insert a reaction drawing and let RSpace calculate stoichiometry automatically

✔ Design reaction tables from scratch and add reactants, products, and reagents from your chemicals in RSpace or from PubChem

✔ Link reagents to your inventory so stock levels are visible from within your experimental plan

✔ Deduct stock as you run an experiment, keeping inventory accurate without extra steps

✔ Reaction data and stoichiometry tables are included when you export or share your documents

Open source chemistry

RSpace chemistry is built on actively developed open-source components.

✔ Built on Ketcher, OpenBabel, and Indigo — widely used open-source chemistry tools

✔ The chemistry engine is part of the open RSpace codebase, open to community contribution

View GitHub

Outlook: Making your chemistry research discoverable and actionable!

We are working on making chemistry-related metadata available in generalist repositories like Dataverse and domain repositories like Chemotion, so that structures, reactions, and experimental data are more discoverable and actionable.

Let us know what’s missing from your chemistry workflows!

Do you have a repository, chemistry tool or functionality you would like to see supported? Get in touch!

RSpace is an open-source, generalist ELN with robust chemistry support. Chemistry works the way you expect it to, whether you're working with chemicals, structures or reactions.

Complete Your Research Ecosystem

RSpace offers integrated solutions across your entire research workflow

Document & Organise Research

Collaborative electronic lab notebook with chemistry workflows and an integrated inventory system

Learn about ELN →

Manage Samples at Scale

Mobile-first sample and inventory management with offline field collection and IGSN ID support

Learn about Samples →

Orchestrate Research Infrastructure

Unified platform for FAIR data management with comprehensive PID support and tool integration

Learn about Orchestration →